Alias ReadPoint

A region, interval or point of the reference/read.

alias ReadPoint = Region!(ulong,ulong,"readId",0L);

A point is a zero-based coordinate (property value) on the contig/read specified by contigId/readId.

An interval is a pair of zero-based coordinates describing the right-open interval [begin, end) on the contig/read specified by contigId/readId.

A region is a collection of disjunctive intervals. When creating or expanding a region the intervals are normalized, i.e. merged if they overlap. This is the internal representation of masks.

See also

Region, Region.TaggedInterval, Region.TaggedPoint